Hold fire on the shellholders Tom, they will only make the problem worse !! They will make the case enter the die even less and you will never bump the shoulder.
In the partner press as you indicate the shell holder just about hits the die when set up for a 1 thou shoulder bump. All good.
When you have put the same shell holder and die in the new press there is more stretch in the press and the same set up as in the partner press will not size the case the right amount.
That doesn't alter the fact that if the shellholder hits the bottom of the die the case shoulder will be forced back more than you need. The die and shellholder will work and the press they are in is irrelevant.
To allow for the extra stretch of the press frame you will need to wind the die further into the press than it is now but when sizing a case the press will stretch and the die will raise up relative to the shellholder and when set right will end up in the same relative place as it was in the partner.
Try this:
wind the die in so it just bumps the shellholder with the ram all the way up, just kisses it lightly. Now lube and size a case and get down at eye level and have a look at what happens, the shell holder will no longer reach the die. That gap is the stretch that you need to allow for.
Put no shim under the die collar and wind the die down until the shell holder bumps hard on the shell holder and still hits the shell holder when you size a case, just keep winding it in, you won't hurt anything. Now when the die is in far enough so that the shell holder stays on the die you can add shims to lift the die back up some until you reduce the shoulder bump as needed. At the right setting with shims the shell holder will just miss the die at the right bump just like it did in the partner press. Depening on haw far in you wind the die you might need a decent stack of shims to get the bump right. If you needed say 15 thou of shims you could simply wind the lock ring in by 10 thou worth and fine tune the shims again to end up with something around 5 thou.
It'd probably be easier to set up if the shellholder was skimmed by asy 10 - 15 thou so it never hits the die but that isn't vital.
Bryce